v 2 d Programs for choosing htSNPs. Now superceded by htSNP2 d d David Clayton d d Diabetes and Inflammation Laboratory Tel: 44 (0)1223 762669 d Cambridge Institute for Medical Research Fax: 44 (0)1223 762102 d Wellcome Trust/MRC Building david.clayton@cimr.cam.ac.uk d Addenbrooke's Hospital, Cambridge, CB2 2XY www-gene.cimr.cam.ac.uk/clayton/ d d hapdiv.ado Calculate haplotype diversity explained by subset of loci d haplist.ado List haplotypes in groups determined by htSNPs d htsubsets.ado Search all subsets of loci for optimum choice of htSNPs d htsnp.pdf Brief description of the theory d gad2.dta Eg. dataset (Used by Johnson et al. Nature Genetics, 2001) d tcf8.dta Eg. dataset (Used by Johnson et al. Nature Genetics, 2001) * f htSNP/hapdiv.ado f htSNP/hapdiv.hlp * f htSNP/haplist.ado f htSNP/haplist.hlp * f htSNP/htsubsets.ado f htSNP/htsubsets.hlp * f htSNP/htsnp.pdf * f htSNP/gad2.dta f htSNP/tcf8.dta